Home > Academics > Academic Units > Departments > Computer Science and Engineering > Pralay Mitra
Ph.D., Indian Institute of Science, Bangalore
Associate Professor
Computer Science and Engineering
We are interested in realizing the biological phenomenon through computational and experimental techniques. The focus is on developing new computational algorithms and tools for biological and clinical investigators. Some of our broad research areas include: Interaction Network in Biology, Protein Design and Stability Analysis, Artificial Intelligence-based Approach to Investigate Cancer Progression, Designing High-throughput Technique for Drug Discovery, Whole Cell Modeling.
A Network-based Zoning for Parallel Whole-Cell Simulation by Das B., Patil A. R., Mitra P. Bioinformatics 35 88-94 (2019)
Analyzing change in protein stability associated with Single Point Deletions in a newly defined protein structure database by Banerjee A., Levy Y. , Mitra P. Journal of Proteome Research 18 1402-1410 (2019)
An evolution-based approach to de novo protein design and case study on Mycobacterium Tuberculosis by Mitra P., Shultis D. , Brender J. R., Czajka J. , Marsh D. , Gray F. , Cierpicki T. , Zhang Y. PLoS Computational Biology 9 e1003298- (2013)
Combining Bayes classification and point group symmetry under Boolean framework for enhanced protein quaternary structure inference by Mitra P., Pal D. Structure 19 304-312 (2011)
EvoDesign: de novo protein design based on structural and evolutionary profiles by Mitra P., Shultis D. , Zhang Y. Nucleic Acids Research 41 W273-W280 (2013)
Using correlated parameters for improved ranking of protein-protein docking decoys by Mitra P., Pal D. Journal of Computational Chemistry 32 787-796 (2011)
New measures for estimating surface complementarity and packing at protein-protein interfaces by Mitra P., Pal D. FEBS Letters 584 1163-1168 (2010)
How many protein-protein interaction types exist in nature? by Garma L., Mukherjee S. , Mitra P. , Zhang Y. PLoS One 7 e389- (2012)
Changing the Apoptosis Pathway through Evolutionary Protein Design by Shultis D., Mitra P. , .. .. , Wang S. , Zhang Y. Journal of Molecular Biology 431 825-841 (2019)
PRUNE and PROBE two modular web services for protein-protein docking by Mitra P., Pal D. Nucleic Acids Research 39 229-234 (2011)
Designer Therapeutic Elucidation of Novel Small Molecular Inhibitor Targeting ETV6-NTRK3 Associated Gene Fusion in Glioblastoma Indian Council of Medical Research, Dept. of Health Research, Ministry of Health and Family Welfare
Anupam Banerjee
Area of Research: Bioinformatics
Barnali Das
Area of Research: Bioinformatics
Abantika Pal
Area of Research: Bioinformatics
Angana Biswas
Area of Research: Cancer Biology
Shubhrangshu Ghosh
Area of Research: Bioinformatics
Purnima Gautam
Area of Research: Bioinformatics
Suvendu Nandi
Area of Research: Cancer Drug Discovery
