Biomolecular EPR Spectroscopy Lab:
Our research lies at the interface of chemistry, biology, and spectroscopy, with electron paramagnetic resonance (EPR) spectroscopy at its core. EPR probes the interaction of paramagnetic centers with magnetic fields, providing detailed insights into their local environments, including structural information on nearby NMR-active nuclei and other paramagnetic centers separated by nanometer-scale distances. We employ both continuous-wave (CW) and pulsed EPR methodologies to obtain molecular-level insights into complex biological processes in bioinorganic and biophysical chemistry.
In the area of biophysical chemistry, our work focuses on understanding the structure–dynamics–function relationships of proteins, with a particular emphasis on intrinsically disordered proteins associated with human diseases. Since many biomolecules are diamagnetic, we utilize site-directed spin labelling (SDSL), where small paramagnetic probes (spin labels) are introduced at specific sites within the protein. These labels report on the local chemical environment and can interact with other labels positioned several nanometers away. Such interactions provide valuable information on protein folding, conformational heterogeneity, structural transitions, and intermolecular interactions.
In parallel, in the field of bioinorganic chemistry, we investigate the structure and reactivity of metalloproteins and their model complexes. Our studies focus on identifying and characterizing transient intermediates and elucidating reaction mechanisms, contributing to a deeper understanding at the molecular level.
If you have a background in chemistry or biochemistry (or related discipline) and are interested in pursuing projects, PhD, or postdoctoral research in these areas, please feel free to contact me at manasseal@edu.iitkgp.ac.in
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RNA binding and coacervation promote preservation of peptide form and function across the heterochiral homochiral divide by Seal M., Edelstein I. , Scolnik Y. , Weil-ktorza O. , Metanis N. , Levy Y. , Longo L. M., Goldfarb D. Protein Science 34 e702- (2025)
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Mesoscale properties of protein clusters determine the size and nature of liquid-liquid phase separation (LLPS) by Golani G., Seal M. , Kar M. , Hyman A. A., Goldfarb D. , Safran S. Communications Physics 8 226- (2025)
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Host guest geometry in paramagnetic cavitands elucidated by 19F electron-nuclear double resonance by Bogdanov A., Seal M. , Goren E. , Bar-shir A. , Goldfarb D. Physical Chemistry Chemical Physics 27 3885-3896 (2025)
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Core-shell model of the clusters of CPEB4 isoforms preceding liquid-liquid phase separation by Oranges M., Jash C. , Golani G. , Seal M. , Cohen S. R., Rosenhek-goldian I. , Bogdanov A. , Safran S. , Goldfarb D. Biophysical Journal 123 2604-2622 (2024)
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Extending the Range of Distances Accessible by 19F Electron Nuclear Double Resonance in Proteins Using High-Spin Gd(III) Labels by Bogdanov A., Frydman V. , Seal M. , Rapatskiy L. , Schnegg A. , Zhu W. , Iron M. , Gronenborn A. M., Goldfarb D. Journal of the American Chemical Society 149 6157-6167 (2024)
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Frequency swept pulses for the enhanced resolution of ENDOR spectra detecting on higher spin transitions of Gd (III) by Rogers C. J., Bogdanov A. , Seal M. , Thorntorn M. E., Su X. , Natrajan L. S., Goldfarb D. , Bowen A. M. Journal of Magnetic Resonance 107447- (2023)
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GdIII 19F Distance Measurements for Proteins in Cells by Electron Nuclear Double Resonance by Seal M., Zhu W. , Dalaloyan A. , Feintuch A. , Bogdanov A. , Frydman V. , Su . , Gronenborn A. M., Goldfarb D. Angewandte Chemie International Edition 62 e2022187- (2023)
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Peptide-RNA coacervates as a cradle for the evolution of folded domains by Seal M., Weil-ktorza O. , Despotovic D. , Tawfik D. S., Levy Y. , Metanis N. , Longo L. M., Goldfarb D. Journal of the American Chemical Society 144 14150-14160 (2022)
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The effect of spin-lattice relaxation on DEER background decay by Seal M., Feintuch A. , Goldfarb D. Journal of Magnetic Resonance 345 107327- (2022)
Principal Investigator
- Dynamics and Function of Human Cardiac Troponin Associated with Cardiovascular Disease Using Electron Paramagnetic Resonance (EPR) Spectroscopic Techniques SRIC, IIT KHARAGPUR
- Metallo-Oxygenases: Unravelling the Mystery for Biotechnological Applications Anusandhan National Research Foundation (ANRF)
- Role of Silica in Prebiotic Polypeptide Synthesis Anusandhan National Research Foundation (ANRF)
Ph. D. Students
Bhaskar Paul
Area of Research: Biophysical Chemistry, Spectroscopy
Debasis Pal Chowdhury
Area of Research: Biophysical Chemistry, Spectroscopy
Jayoshri Mallick
Area of Research: Biophysical Chemistry, Spectroscopy